Skip to contents

Retrieve NCBI GENOME_REPORTS file

Source: R/getGENOMEREPORT.R
getGENOMEREPORT.Rd

Retrieves NCBI GENOME_REPORTS file from ftp://ftp.ncbi.nlm.nih.gov/genomes/GENOME_REPORTS/overview.txt.

Usage

getGENOMEREPORT(
  local_file = file.path(cachedir(), "_ncbi_downloads", "overview.txt")
)

Arguments

local_file

character, file path, default: file.path(cachedir(), "_ncbi_downloads", "overview.txt")

Value

a tibble object with the report

Author

Hajk-Georg Drost

Examples

if (FALSE) { # \dontrun{
report <- getGENOMEREPORT()
report
} # }