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This function reads an organism specific CDS stored in a defined file format.

Usage

read_gff(file)

Arguments

file

a character string specifying the path to the file storing the CDS.

Value

Either a Biostrings or data.table object.

Details

This function takes a string specifying the path to the GFF file of interest (e.g. the path returned by getGFF).

See also

Other gff: getGFFSet(), getGFF()

Other readers: read_cds(), read_genome(), read_proteome(), read_rna()

Author

Hajk-Georg Drost