List the Linkage Groups of a Genome Map

A linkage group is BrAPI's generic term for a named section of a map - it may represent a chromosome, a scaffold, or a generic linkage group.

Usage

brapi_map_linkage_groups(con, mapDbId)

Arguments

con

A brapi_connection() object.

mapDbId

Character. The unique genome map identifier.

Value

A tibble with one row per linkage group on the map.

BrAPI endpoint

GET /maps/{mapDbId}/linkagegroups - see the v2.1 specification.

Examples

# \donttest{
con <- brapi_connection("https://test-server.brapi.org")
brapi_map_linkage_groups(con, "genome_map1")
#> # A tibble: 1 × 4
#>   additionalInfo   linkageGroupName markerCount maxPosition
#>   <list>           <chr>                  <int>       <int>
#> 1 <named list [1]> Chromosome 1               3    50000000
# }