The 'MAPPING_' file groups multiple categorisations onto one line e.g.
Domain_code could read '1,3'
This function creates a new longer output 'L-MAPPING_' which gives each
categorisation its own row.
This 'L-MAPPING_' may be useful when using these csv files in later analyses
Usage
map_convert(
csv_to_convert,
csv_to_convert_dir,
output_dir = csv_to_convert_dir,
quiet = FALSE
)Arguments
- csv_to_convert
Name of 'MAPPING_' csv file created from metadata_map
- csv_to_convert_dir
Location of csv_to_convert
- output_dir
Location where the 'L-MAPPING_' csv file will be saved.
- quiet
Default is FALSE. Change to TRUE to quiet the cli_alert_info and cli_alert_success messages. Default is csv_to_convert_dir.
Examples
# Locate file path and file name for the example files in the package
demo_csv_to_convert_dir <- system.file("outputs", package = "mapmetadata")
demo_csv_to_convert <- "MAPPING_360_NCCHD_CHILD_2025-02-14-18-14-01.csv"
temp_output_dir <- tempdir()
# Run the function
map_convert(
csv_to_convert = demo_csv_to_convert,
csv_to_convert_dir = demo_csv_to_convert_dir,
output_dir = temp_output_dir)
#> ✔ Long format categorisations saved to:
#> /tmp/Rtmpk8yfyf/L-MAPPING_360_NCCHD_CHILD_2025-02-14-18-14-01.csv