Modules on GitHub

Last updated: 20:02, 26 November 2020 (UTC)
Program Details Versions Updated Stars
PyRate Estimate speciation, extinction, and preservation rates from fossil occurrence data using a Bayesian framework. latest, 2.0 25 Oct 19 1
wikit Fetch topic summaries from Wikipedia latest 16 Jan 20 0
trimal A tool for automated alignment trimming in large-scale phylogenetic analyses. latest 16 Jan 20 0
RAxML Randomized Axelerated Maximum Likelihood (8.2.12 HPC PTHREADS SSE3) for inferring phylogenies latest 16 Jan 20 0
pathd8 Estimating divergence times in large phylogenetic trees. latest 16 Jan 20 0
pasta PASTA (Practical Alignment using Sate and TrAnsitivity) algorithm. latest 16 Jan 20 0
PartitionFinder2 PartitionFinder 2 is free open source software to select best-fit partitioning schemes and models of molecular evolution for phylogenetic analyses. latest 16 Jan 20 0
mafft Multiple alignment program for amino acid or nucleotide sequences latest 16 Jan 20 0
figlet ASCII art using the figlet program latest 16 Jan 20 0
BAMM Bayesian Analysis of Macroevolutionary Mixtures latest, 2.5 16 Jan 20 0
astral Accurate Species TRee ALgorithm latest 16 Jan 20 0
pyphlawd TODO write a detailed description advertising what this module does! Note, newlines should be followed by four spaces. latest 07 Jan 20 0
beast Bayesian Evolutionary Analysis Sampling Trees latest 25 Oct 19 0
revbayes Bayesian phylogenetic inference using probabilistic graphical models and an interpreted language latest 25 Oct 19 0
blast Basic Local Alignment Search Tool (Pre-compiled BLAST+, version 2.71.) latest, 2.7.1 25 Oct 19 0
hello world Template module for demonstrating outsider latest 19 Aug 19 0