Add local sequences to previously downloaded sequences

This function adds sequences located in a particular folder (default is "0.AdditionalSequences") to fasta files in another folder (default is "0.Sequences"). Files must be in FASTA format and names of the files should perfectly match the ones in the previously downloaded folder (e.g. "0.Sequences"). This function creates a third new folder "0.0.OriginalDownloaded" containing the originally downloaded sequences. The sequences in the "0.Sequences" folder get replaced with the combined ones. Note that new sequences can be added even for just a fraction of the originally downloaded genes.

Usage

sq.add(folderDownloaded = "0.Sequences", folderNew = "0.AdditionalSequences")

Arguments

folderDownloaded

Name of the folder with downloaded sequences.

folderNew

Name of the folder with local sequences.

Value

None

Examples

if (FALSE) { # \dontrun{
sq.add(folderDownloaded = "0.Sequences",
       folderNew = "0.AdditionalSequences")
} # }