Get definition from GenBank

Return the definition line for an accession ID.

Usage

gb_definition_get(id)

Arguments

id

character, sequence accession ID(s)

Value

named vector of definitions, if no results found NULL

See also

ncbi_acc_get()

Other get: gb_fasta_get(), gb_organism_get(), gb_record_get(), gb_sequence_get(), gb_version_get()

Examples

library(restez)
restez_path_set(filepath = tempdir())
#> ... Creating '/tmp/RtmpJvhvXj/restez'
#> ... Creating '/tmp/RtmpJvhvXj/restez/downloads'
demo_db_create(n = 5)
(def <- gb_definition_get(id = 'demo_1'))
#>                                 demo_1 
#> "A demonstration sequence | id demo_1" 
(defs <- gb_definition_get(id = c('demo_1', 'demo_2')))
#>                                 demo_1                                 demo_2 
#> "A demonstration sequence | id demo_1" "A demonstration sequence | id demo_2" 


# delete demo after example
db_delete(everything = TRUE)