Get hierarchy down from tsn

hierarchy_down(tsn, wt = "json", raw = FALSE, ...)

hierarchy_up(tsn, wt = "json", raw = FALSE, ...)

hierarchy_full(tsn, wt = "json", raw = FALSE, ...)

Arguments

tsn

TSN for a taxonomic group (numeric). Required.

wt

(character) One of "json" or "xml". Required.

raw

(logical) Return raw JSON or XML as character string. Required. Default: FALSE

...

curl options passed on to crul::HttpClient

Details

Hierarchy methods:

  • hierarchy_down: Get hierarchy down from tsn

  • hierarchy_up: Get hierarchy up from tsn

  • hierarchy_full: Get full hierarchy from tsn

Examples

if (FALSE) { ## Full down (class Mammalia) hierarchy_down(tsn=179913) ## Full up (genus Agoseris) hierarchy_up(tsn=36485) ## Full hierarchy ### genus Liatris hierarchy_full(tsn=37906) ### get raw data back hierarchy_full(tsn=37906, raw = TRUE) ### genus Baetis, get xml back hierarchy_full(100800, wt = "xml") }