Get number of leaves for each taxon in an object of type taxonomy() or taxmap(), not including leaves of subtaxa etc.

obj$n_leaves_1()
n_leaves_1(obj)

Arguments

obj

(taxonomy() or taxmap())

Value

numeric

See also

Examples

# Get number of leaves for each taxon n_leaves_1(ex_taxmap)
#> b c d e f g h i j k l m n o p q r #> 0 0 0 0 0 0 1 1 1 1 2 0 0 0 0 0 0
# Filter taxa based on number of leaves filter_taxa(ex_taxmap, n_leaves_1 > 0)
#> <Taxmap> #> 5 taxa: h. Panthera, i. Felis, j. Notoryctes, k. homo, l. Solanum #> 5 edges: NA->h, NA->i, NA->j, NA->k, NA->l #> 4 data sets: #> info: #> # A tibble: 6 x 4 #> taxon_id name n_legs dangerous #> <chr> <chr> <dbl> <lgl> #> 1 h tiger 4 TRUE #> 2 i cat 4 FALSE #> 3 j mole 4 FALSE #> # … with 3 more rows #> phylopic_ids: a named vector of 'character' with 6 items #> h. e148eabb-f138-43[truncated] ... l. 63604565-0406-46[truncated] #> foods: a list of 6 items named by taxa: #> h, i, j, k, l, l #> abund: #> # A tibble: 8 x 5 #> taxon_id code sample_id count taxon_index #> <chr> <fct> <fct> <dbl> <int> #> 1 h T A 1 1 #> 2 i C A 2 2 #> 3 j M B 5 3 #> # … with 5 more rows #> 1 functions: #> reaction