Skip to contents

Parse BEAST2 NS output

Source: R/parse_beast2_output_to_ns.R
parse_beast2_output_to_ns.Rd

Parse the BEAST2 output when run with the BEAST2 NS ('Nested Sampling') package.

Usage

parse_beast2_output_to_ns(output)

Arguments

output

screen output

Value

a list with the following elements:

  • marg_log_lik the marginal log likelihood estimate

  • marg_log_lik_sd the standard deviation around the estimate

See also

use create_test_ns_output to obtain a test screen output.

Author

Richèl J.C. Bilderbeek

Examples

beastier::remove_beaustier_folders()
beastier::check_empty_beaustier_folders()

parse_beast2_output_to_ns(
  output = create_test_ns_output()
)
#> $marg_log_lik
#> [1] -141.1645
#> 
#> $marg_log_lik_sd
#> [1] 1.160143
#> 
#> $ess
#> [1] 5.659472
#> 

beastier::remove_beaustier_folders()
beastier::check_empty_beaustier_folders()