Create a parameter called 'rate CT'

create_rate_ct_param(id = NA, value = "1.0", lower = "0.0")

Arguments

id

the parameter's ID

value

value of the parameter

lower

lowest possible value of the parameter. If the parameter is estimated, lower must be less than value

Value

a parameter called 'rate CT'

See also

the function create_param contains a list of all parameters that can be created

Author

Richèl J.C. Bilderbeek

Examples

# Create parameter
rate_ct_param <- create_rate_ct_param(value = 1)

# Use the parameter to create a BEAST2 input file
beast2_input_file <- get_beautier_tempfilename()
create_beast2_input_file(
  input_filename = get_fasta_filename(),
  beast2_input_file,
  site_model = create_gtr_site_model(
    rate_ct_param = rate_ct_param
  )
)
file.remove(beast2_input_file)
#> [1] TRUE