Creates the tracelog section of the logger section
of a BEAST2 XML parameter file
Arguments
- input_filename
A FASTA filename. Use
get_fasta_filenameto obtain a testing FASTA filename.- inference_model
a Bayesian phylogenetic inference model. An inference model is the complete model setup in which a site model, clock model, tree prior and more are specified. Use create_inference_model to create an inference model. Use check_inference_model to check if an inference model is valid. Use rename_inference_model_filenames to rename the files in an inference model.