Create a Yule tree prior

create_yule_tree_prior(
  id = NA,
  birth_rate_distr = create_uniform_distr()
)

Arguments

id

the ID of the alignment

birth_rate_distr

the birth rate distribution, as created by a create_distr function

Value

a Yule tree_prior

See also

An alignment ID can be extracted from its FASTA filename using get_alignment_id

Author

Richèl J.C. Bilderbeek

Examples

 yule_tree_prior <- create_yule_tree_prior()

 beast2_input_file <- get_beautier_tempfilename()
 create_beast2_input_file(
   input_filename = get_fasta_filename(),
   beast2_input_file,
   tree_prior = yule_tree_prior
)
file.remove(beast2_input_file)
#> [1] TRUE