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Determine if an MRCA prior's alignment IDs is present in the FASTA file

Source: R/is_mrca_align_id_in_fasta.R
is_mrca_align_id_in_fasta.Rd

Determine if an MRCA prior's alignment IDs is present in the FASTA file

Usage

is_mrca_align_id_in_fasta(mrca_prior, fasta_filename)

Arguments

mrca_prior

a Most Recent Common Ancestor prior, as returned by create_mrca_prior

fasta_filename

a FASTA filename. Use get_fasta_filename to obtain a testing FASTA filename. Note that BEAST2 also supports missing data, by using a dash (-) or question mark (?) as a sequence.

Value

TRUE if the MRCA prior's alignment IDs is present in the FASTA file. Returns FALSE otherwise

Author

Richèl J.C. Bilderbeek