code_to_function() is a quick (and very dirty) way to retrofit drake to an existing script-based project. It parses individual \*.R/\*.RMD files into functions so they can be added into the drake workflow.

code_to_function(path, envir = parent.frame())

Arguments

path

Character vector, path to script.

envir

Environment of the created function.

Value

A function to be input into the drake plan

Details

Most data science workflows consist of imperative scripts. drake, on the other hand, assumes you write functions. code_to_function() allows for pre-existing workflows to incorporate drake as a workflow management tool seamlessly for cases where re-factoring is unfeasible. So drake can monitor dependencies, the targets are passed as arguments of the dependent functions.

See also

Examples

if (FALSE) { isolate_example("contain side effects", { if (requireNamespace("ggplot2", quietly = TRUE)) { # The `code_to_function()` function creates a function that makes it # available for drake to process as part of the workflow. # The main purpose is to allow pre-existing workflows to incorporate drake # into the workflow seamlessly for cases where re-factoring is unfeasible. # script1 <- tempfile() script2 <- tempfile() script3 <- tempfile() script4 <- tempfile() writeLines(c( "data <- mtcars", "data$make <- do.call('c',", "lapply(strsplit(rownames(data), split=\" \"), `[`, 1))", "saveRDS(data, \"mtcars_alt.RDS\")" ), script1 ) writeLines(c( "data <- readRDS(\"mtcars_alt.RDS\")", "mtcars_lm <- lm(mpg~cyl+disp+vs+gear+make,data=data)", "saveRDS(mtcars_lm, \"mtcars_lm.RDS\")" ), script2 ) writeLines(c( "mtcars_lm <- readRDS(\"mtcars_lm.RDS\")", "lm_summary <- summary(mtcars_lm)", "saveRDS(lm_summary, \"mtcars_lm_summary.RDS\")" ), script3 ) writeLines(c( "data<-readRDS(\"mtcars_alt.RDS\")", "gg <- ggplot2::ggplot(data)+", "ggplot2::geom_point(ggplot2::aes(", "x=disp, y=mpg, shape=as.factor(vs), color=make))", "ggplot2::ggsave(\"mtcars_plot.png\", gg)" ), script4 ) do_munge <- code_to_function(script1) do_analysis <- code_to_function(script2) do_summarize <- code_to_function(script3) do_vis <- code_to_function(script4) plan <- drake_plan( munged = do_munge(), analysis = do_analysis(munged), summary = do_summarize(analysis), plot = do_vis(munged) ) plan # drake knows "script1" is the first script to be evaluated and ran, # because it has no dependencies on other code and a dependency of # `analysis`. See for yourself: make(plan) # See the connections that the sourced scripts create: if (requireNamespace("visNetwork", quietly = TRUE)) { vis_drake_graph(plan) } } }) }