Package index
High-level functions
These functions offers an intuitive and user-friendly way to import (and possibly) transform multiple files at once in a given location. Please refer to the Batch import with lr_get_spec() and lr_get_metadata() vignette.
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lr_get_spec() - Extract spectral data from spectra files
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lr_get_metadata() - Extract metadata from spectra files
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lr_convert_tocsv() - Convert spectral data files to csv files
Low-level parsers
These functions are destined to advanced users that want a more flexible way to import spectral data. They can only read a single file at a time and users are responsible for writing a loop if necessary. . Please refer to the Renormalise spectral data with a custom reference vignette.
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lr_parse_trm()lr_parse_abs()lr_parse_roh()lr_parse_rfl8()lr_parse_raw8()lr_parse_irr8()lr_parse_avantes_trm()lr_parse_avantes_abs()lr_parse_avantes_roh()lr_parse_avantes_rfl8()lr_parse_avantes_raw8()lr_parse_avantes_irr8() - Parse Avantes binary file
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lr_parse_ttt()lr_parse_trt()lr_parse_avantes_ttt()lr_parse_avantes_trt() - Parse Avantes converted file
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lr_parse_spc()lr_parse_craic_spc()lr_parse_oceanoptics_spc() - Parse SPC binary file
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lr_parse_csv() - Parse csv files
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lr_parse_generic() - Generic function to parse spectra files that don't have a specific parser
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lr_parse_jaz()lr_parse_jazirrad()lr_parse_oceanoptics_jaz()lr_parse_oceanoptics_jazirrad() - Parse OceanOptics converted file
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lr_parse_jdx()lr_parse_oceanoptics_jdx() - Parse OceanOptics JCAMP-DX (.jdx) file
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lr_parse_procspec()lr_parse_oceanoptics_procspec() - Parse OceanOptics ProcSpec file
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dispatch_parser() - Internal function to dispatch files to the correct parser
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lightrlightr-package - lightr: Read Spectrometric Data and Metadata
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lr_compute_processed() - Compute processed spectral data