Set the IDs of multiple nodes

Return a tree with the IDs of nodes altered.

Usage

setNdsID(tree, ids, vals, parallel = FALSE, progress = "none")

Arguments

tree

TreeMan object

ids

ids to be changed

vals

new ids

parallel

logical, make parallel?

progress

name of the progress bar to use, see create_progress_bar

Details

Runs setNdID() over multiple nodes. Warning: all IDs must be unique, avoid spaces in IDs, only use numbers, letters and underscores. Parellizable.

See also

setNdID https://github.com/DomBennett/treeman/wiki/set-methods

Examples

tree <- randTree(10)
new_ids <- paste0("heffalump_", 1:tree["ntips"])
tree <- setNdsID(tree, tree["tips"], new_ids)
summary(tree)
#> Tree (TreeMan Object):
#>   + 10 tips
#>   + 9 internal nodes
#>   + Binary
#>   + PD 9.79
#>   + Root node is "n1"