Convert taxon IDs to scientific names

Convert taxon IDs to scientific names

Usage

taxid2name(x, db = "ncbi", verbose = TRUE, warn = TRUE, ...)

Arguments

x

(character) Vector of taxon keys for the given database

db

(character) The database to search, one of ncbi, itis, gbif, col, wfo, or tpl

verbose

(logical) Print verbose messages

warn

(logical) If TRUE, raise a warning if any taxon IDs can not be found

...

Additional arguments passed to database specific classification functions

Value

character vector of scientific names

Examples

if (FALSE) { # \dontrun{
taxid2name(c(3702, 9606))
taxid2name(c(154395, 154357, 23041, 154396), db = "itis")
taxid2name(c('wfo-0000541830', 'wfo-0000291463'), db = "wfo")
taxid2name("wfo-7000000057", db = "wfo")
taxid2name(2877951, db = "gbif")
taxid2name(c(2877951, 5386), db = "gbif")
taxid2name(c("C66T4", "C7ZVH", "TP"), db = "col")
taxid2name(c("kew-2614538", "kew-2895433", "kew-2615007"), db = "tpl")
} # }