Documentation of general function arguments. This function does nothing. It is intended to inherit function argument documentation.

Documentation of general function arguments. This function does nothing. It is intended to inherit function argument documentation.

Usage

default_params_doc(
  log_filename,
  sample_interval,
  state_filename,
  trace,
  tracelog_filename,
  trees_filename,
  trees_filenames,
  verbose
)

Arguments

log_filename

deprecated name of the BEAST2 tracelog .log output file. Use tracelog_filename instead

sample_interval

the interval in timesteps between samples

state_filename

name of the BEAST2 state .xml.state output file

trace

the values

tracelog_filename

name of the BEAST2 tracelog .log output file, as can be read using parse_beast_tracelog_file

trees_filename

name of a BEAST2 posterior .trees file, as can be read using parse_beast_trees

trees_filenames

the names of one or more a BEAST2 posterior .trees file. Each .trees file can be read using parse_beast_trees

verbose

set to TRUE for more output

Note

This is an internal function, so it should be marked with @noRd. This is not done, as this will disallow all functions to find the documentation parameters

Author

Richèl J.C. Bilderbeek