returns a matrix indiating how many studies have recorded individual receptor-odorant combinations
Usage
count_studies(ors = door_default_values("ORs"),
odor_data = door_default_values("odor"),
char.columns = door_default_values("num.charColumns"),
ident = door_default_values("ident"))Examples
# load some data
library(DoOR.data)
load_door_data(nointeraction = TRUE)
#run count studies and plot the result
count <- count_studies()
image(count)
head(count)
#> ac1A ac1B ac2A ac2B ac3A ac3B ac4 Or1a Or2a Or7a
#> SFR 2 1 2 1 3 3 3 1 3 10
#> XLYOFNOQVPJJNP-UHFFFAOYSA-N 1 0 1 0 2 2 2 1 1 2
#> VHUUQVKOLVNVRT-UHFFFAOYSA-N 1 0 1 0 2 2 2 0 1 2
#> KIDHWZJUCRJVML-UHFFFAOYSA-N 2 1 2 1 3 3 3 0 1 4
#> VHRGRCVQAFMJIZ-UHFFFAOYSA-N 0 0 0 0 1 1 1 0 1 2
#> QGZKDVFQNNGYKY-UHFFFAOYSA-N 1 1 1 1 1 1 1 0 0 2
#> Or9a Or10a Or13a Or19a Or22a Or22b Or22c Or23a
#> SFR 2 6 7 3 10 0 2 1
#> XLYOFNOQVPJJNP-UHFFFAOYSA-N 1 1 2 0 1 0 1 0
#> VHUUQVKOLVNVRT-UHFFFAOYSA-N 2 2 1 2 2 0 0 1
#> KIDHWZJUCRJVML-UHFFFAOYSA-N 2 3 2 2 3 0 0 1
#> VHRGRCVQAFMJIZ-UHFFFAOYSA-N 1 1 0 2 1 0 0 1
#> QGZKDVFQNNGYKY-UHFFFAOYSA-N 0 1 1 0 1 0 0 0
#> Or24a Or30a Or33a Or33b Or33c Or35a Or42a Or42b
#> SFR 2 3 1 4 1 3 6 7
#> XLYOFNOQVPJJNP-UHFFFAOYSA-N 1 2 1 1 0 1 3 2
#> VHUUQVKOLVNVRT-UHFFFAOYSA-N 0 0 0 1 0 1 1 1
#> KIDHWZJUCRJVML-UHFFFAOYSA-N 0 0 0 1 0 1 1 2
#> VHRGRCVQAFMJIZ-UHFFFAOYSA-N 0 0 0 1 0 1 0 0
#> QGZKDVFQNNGYKY-UHFFFAOYSA-N 0 0 0 0 0 0 0 1
#> Or43a Or43b Or45a Or45b Or46a Or47a Or47b Or49a
#> SFR 1 3 3 3 3 4 6 3
#> XLYOFNOQVPJJNP-UHFFFAOYSA-N 0 1 2 2 1 1 0 2
#> VHUUQVKOLVNVRT-UHFFFAOYSA-N 1 2 0 0 1 1 1 0
#> KIDHWZJUCRJVML-UHFFFAOYSA-N 1 2 0 0 1 1 1 0
#> VHRGRCVQAFMJIZ-UHFFFAOYSA-N 1 1 0 0 0 1 1 0
#> QGZKDVFQNNGYKY-UHFFFAOYSA-N 0 0 0 0 0 0 0 0
#> Or49b Or59a Or59b Or59c Or65a Or67a Or67b Or67c
#> SFR 3 3 8 4 2 2 4 3
#> XLYOFNOQVPJJNP-UHFFFAOYSA-N 1 1 1 1 0 0 2 1
#> VHUUQVKOLVNVRT-UHFFFAOYSA-N 2 0 2 1 1 1 0 2
#> KIDHWZJUCRJVML-UHFFFAOYSA-N 3 0 3 1 1 1 0 3
#> VHRGRCVQAFMJIZ-UHFFFAOYSA-N 1 0 1 0 1 1 0 1
#> QGZKDVFQNNGYKY-UHFFFAOYSA-N 1 0 1 0 0 0 0 1
#> Or67d Or71a Or74a Or82a Or85a Or85b Or85c Or85d
#> SFR 2 4 3 6 1 4 3 3
#> XLYOFNOQVPJJNP-UHFFFAOYSA-N 0 1 2 2 0 1 2 1
#> VHUUQVKOLVNVRT-UHFFFAOYSA-N 0 1 0 2 1 1 0 1
#> KIDHWZJUCRJVML-UHFFFAOYSA-N 0 1 0 3 1 5 0 1
#> VHRGRCVQAFMJIZ-UHFFFAOYSA-N 0 0 0 1 1 1 0 0
#> QGZKDVFQNNGYKY-UHFFFAOYSA-N 0 0 0 1 0 1 0 0
#> Or85e Or85f Or88a Or92a Or94a Or94b Or98a
#> SFR 1 1 3 4 4 4 3
#> XLYOFNOQVPJJNP-UHFFFAOYSA-N 0 0 0 1 2 2 1
#> VHUUQVKOLVNVRT-UHFFFAOYSA-N 0 1 1 1 0 0 2
#> KIDHWZJUCRJVML-UHFFFAOYSA-N 0 1 1 2 0 0 3
#> VHRGRCVQAFMJIZ-UHFFFAOYSA-N 0 1 1 0 0 0 1
#> QGZKDVFQNNGYKY-UHFFFAOYSA-N 0 0 0 1 0 0 1
#> Gr21a.Gr63a ab2B ab4B ab5B pb2A Or69a ac1 ac2
#> SFR 5 4 4 3 3 1 1 1
#> XLYOFNOQVPJJNP-UHFFFAOYSA-N 0 1 1 1 1 0 1 1
#> VHUUQVKOLVNVRT-UHFFFAOYSA-N 0 1 1 1 1 0 1 1
#> KIDHWZJUCRJVML-UHFFFAOYSA-N 0 2 2 2 1 0 1 1
#> VHRGRCVQAFMJIZ-UHFFFAOYSA-N 0 0 1 0 0 0 1 1
#> QGZKDVFQNNGYKY-UHFFFAOYSA-N 3 1 2 1 0 0 0 0
#> ac3_noOr35a Ir31a Ir41a Ir75a Ir75d Ir76a Ir84a
#> SFR 1 1 1 2 1 1 2
#> XLYOFNOQVPJJNP-UHFFFAOYSA-N 1 1 1 2 1 1 2
#> VHUUQVKOLVNVRT-UHFFFAOYSA-N 1 1 1 2 1 1 2
#> KIDHWZJUCRJVML-UHFFFAOYSA-N 1 1 1 2 1 1 2
#> VHRGRCVQAFMJIZ-UHFFFAOYSA-N 1 1 1 2 1 1 2
#> QGZKDVFQNNGYKY-UHFFFAOYSA-N 0 0 0 0 0 0 0
#> Ir92a Ir64a.DC4 Ir64a.DP1m ac1BC ac2BC Or83c
#> SFR 1 1 1 1 1 1
#> XLYOFNOQVPJJNP-UHFFFAOYSA-N 1 1 1 1 1 0
#> VHUUQVKOLVNVRT-UHFFFAOYSA-N 1 1 1 1 1 0
#> KIDHWZJUCRJVML-UHFFFAOYSA-N 1 1 1 1 1 0
#> VHRGRCVQAFMJIZ-UHFFFAOYSA-N 1 1 1 0 0 0
#> QGZKDVFQNNGYKY-UHFFFAOYSA-N 0 0 0 0 0 1