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dplot_across_ru

Source: R/dplot_across_ru.R
dplot_across_ru.Rd

barplot of DoOR responses of a set of odorant across all responding units in DoOR

Usage

dplot_across_ru(odorant,
  response_matrix = door_default_values("door_response_matrix"),
  odor_data = door_default_values("odor"),
  zero = door_default_values("zero"), tag = "Name", limits,
  base_size = 12)

Arguments

odorant

character vecto, one or several InChIKeys

response_matrix

DoOR response matrix, a DoOR response matrix as data source

odor_data

data frame, contains the odorant information.

zero

character, an InChIKey of the odorant that should be set to 0

tag

character, the chemical identifier to plot as odorant name (one of colnames(odor))

limits

numeric of length 2, if provided the ylim will range accordingly

base_size

numeric, the base font size for the ggplot2 plot

Value

a ggplot object

Author

Daniel Münch <daniel.muench@uni-konstanz.de>

Examples

# load data
library(DoOR.data)
library(DoOR.functions)
data(odor)

# plot activation pattern of one or several odorants
dplot_across_ru(trans_id("123-92-2"), tag = "CAS")

dplot_across_ru(odor$InChIKey[4:10])