Update the DoOR odor data with info from odor
. For the function to
work, all DoOR data has to be loaded to the current environment.
Author
Daniel Münch, daniel@muench.bio
Examples
# load data
load_door_data(nointeraction = TRUE)
# modify odor
odor[1,1] <- "acid"
# run
update_door_odorinfo()
# check that data sets have been updated
head(Or22a)
#> Class Name InChIKey CID CAS
#> 1 <NA> sfr SFR SFR SFR
#> 2 other water XLYOFNOQVPJJNP-UHFFFAOYSA-N 962 7732-18-5
#> 3 amine ammonium hydroxide VHUUQVKOLVNVRT-UHFFFAOYSA-N 14923 1336-21-6
#> 4 amine putrescine KIDHWZJUCRJVML-UHFFFAOYSA-N 1045 110-60-1
#> 5 amine cadaverine VHRGRCVQAFMJIZ-UHFFFAOYSA-N 273 462-94-2
#> 6 amine ammonia QGZKDVFQNNGYKY-UHFFFAOYSA-N 222 7664-41-7
#> Hallem.2006.EN Dobritsa.2003.EN Stensmyr.2003.WT Schmuker.2007.TR
#> 1 4 NA NA 4
#> 2 NA NA NA NA
#> 3 17 NA NA NA
#> 4 16 NA NA 3
#> 5 17 NA NA NA
#> 6 NA NA NA 3
#> Pelz.2006.ALEC50 Pelz.2006.AntEC50 Pelz.2005.ALnmr Pelz.2005.Antnmr
#> 1 NA NA 0 0
#> 2 NA NA NA NA
#> 3 NA NA NA NA
#> 4 NA NA NA NA
#> 5 NA NA NA NA
#> 6 NA NA NA NA
#> Gabler.2013.AL Bruyne.2001.WT Bruyne.2010.WT Marshall.2010.WT Hallem.2004.EN
#> 1 0 4 0 0.000 6.186
#> 2 NA NA NA 60.571 NA
#> 3 NA NA NA 44.286 NA
#> 4 NA NA NA 28.000 NA
#> 5 NA NA NA NA NA
#> 6 NA NA NA NA NA
#> Hallem.2004.WT
#> 1 6.915
#> 2 NA
#> 3 NA
#> 4 NA
#> 5 NA
#> 6 NA