Create a clock model from name

Create a clock model from name

Usage

create_clock_model_from_name(clock_model_name)

Arguments

clock_model_name

name of a clock model, must be a name as returned by get_clock_model_names

Value

a clock model, as can be created by create_clock_model

See also

Use create_clock_model to create a clock model

Author

Richèl J.C. Bilderbeek

Examples

check_empty_beautier_folder()

create_clock_model_from_name(get_clock_model_names()[1])
#> $name
#> [1] "relaxed_log_normal"
#> 
#> $id
#> [1] NA
#> 
#> $ucldstdev_distr
#> $ucldstdev_distr$name
#> [1] "gamma"
#> 
#> $ucldstdev_distr$id
#> [1] NA
#> 
#> $ucldstdev_distr$value
#> [1] NA
#> 
#> $ucldstdev_distr$lower
#> [1] NA
#> 
#> $ucldstdev_distr$upper
#> [1] NA
#> 
#> $ucldstdev_distr$alpha
#> $ucldstdev_distr$alpha$name
#> [1] "alpha"
#> 
#> $ucldstdev_distr$alpha$id
#> [1] NA
#> 
#> $ucldstdev_distr$alpha$value
#> [1] 0.5396
#> 
#> $ucldstdev_distr$alpha$estimate
#> [1] FALSE
#> 
#> 
#> $ucldstdev_distr$beta
#> $ucldstdev_distr$beta$name
#> [1] "beta"
#> 
#> $ucldstdev_distr$beta$id
#> [1] NA
#> 
#> $ucldstdev_distr$beta$value
#> [1] 0.3819
#> 
#> $ucldstdev_distr$beta$estimate
#> [1] FALSE
#> 
#> 
#> 
#> $mean_rate_prior_distr
#> $mean_rate_prior_distr$name
#> [1] "uniform"
#> 
#> $mean_rate_prior_distr$id
#> [1] NA
#> 
#> $mean_rate_prior_distr$value
#> [1] NA
#> 
#> $mean_rate_prior_distr$lower
#> [1] NA
#> 
#> $mean_rate_prior_distr$upper
#> [1] Inf
#> 
#> 
#> $mparam_id
#> [1] NA
#> 
#> $mean_clock_rate
#> [1] "1.0"
#> 
#> $n_rate_categories
#> [1] -1
#> 
#> $normalize_mean_clock_rate
#> [1] FALSE
#> 
#> $dimension
#> [1] NA
#> 
#> $rate_scaler_factor
#> [1] 0.75
#> 

check_empty_beautier_folder()