Retrieve and summarise the assembly_summary.txt files from NCBI for all kingdoms

Retrieval function of the assembly_summary.txt file from NCBI for all kingdoms. The assembly_summary.txt files store available species on NCBI.

Usage

getKingdomAssemblySummary(db)

Arguments

db

database name. E.g. refseq or genbank.

See also

getSummaryFile, getMetaGenomeSummary

Author

Hajk-Georg Drost

Examples

if (FALSE) {
test <- getKingdomAssemblySummary(db = "refseq")
test
}