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DrugBank Database Loading

Read DrugBank database and load it into memory for later processing

read_drugbank_xml_db()
Reads DrugBank xml database and load it into memory.

Collective Parsers

Each function return related parsers together

cett()
Run all CETT related parsers
drugs()
Run all drug related parsers
run_all_parsers()
extracts the all drug elements and return data as list of tibbles.

Carriers, Enzymes, Targets, Transporters Parsers

Get Drug carriers, enzymes and transporters and related information

carriers_actions() enzymes_actions() targets_actions() transporters_actions()
Carriers/ Enzymes/ Targets/ Transporters Actions parsers
carriers() enzymes() targets() transporters()
Carriers/ Enzymes/ Targets/ Transporters parsers
carriers_polypep_ex_ident() enzymes_polypep_ex_ident() targets_polypep_ex_ident() transporters_polypep_ex_ident()
Carriers/ Enzymes/ Targets/ Transporters Polypeptide External Identifiers parsers
carriers_polypeptides_go() enzymes_polypeptides_go() targets_polypeptides_go() transporters_polypeptides_go()
Carriers/ Enzymes/ Targets/ Transporters Polypeptide GO Classifier parsers
carriers_polypeptides() enzymes_polypeptides() targets_polypeptides() transporters_polypeptides()
Carriers/ Enzymes/ Targets/ Transporters Polypeptide parsers
carriers_polypeptides_pfams() enzymes_polypeptides_pfams() targets_polypeptides_pfams() transporters_polypeptides_pfams()
Carriers/ Enzymes/ Targets/ Transporters Polypeptide PFAMS parsers
carriers_polypeptides_syn() enzymes_polypeptides_syn() targets_polypeptides_syn() transporters_polypeptides_syn()
Carriers/ Enzymes/ Targets/ Transporters Polypeptide Synonyms parsers

Drug Parsers

Get Drug and its related direct information

drug_affected_organisms()
Drug Affected Organism parser
drug_ahfs_codes()
Drug ahfs-codes parser
drug_atc_codes()
Drug ATC Codes element parser
drug_calc_prop()
Drug Calculated Properties parser
drug_categories()
Drug Categories parser
drug_classification()
Drug Classification parser
drug_dosages()
Drug Dosages parser
drug_ex_identity()
Drug External Identifiers parser
drug_exp_prop()
Drug Experimental Properties parser
drug_external_links()
Drug External Links parser
drug_food_interactions()
Drug Groups parser
drug_general_information()
Drugs General Information parser
drug_groups()
Drug Groups parser
drug_interactions()
Drug Interactions parser
drug_intern_brand()
Drug International Brands parser
drug_manufacturers()
Drug Manufacturers parser
drug_mixtures()
Drug Mixtures parser
drug_packagers()
Drug Packagers parser
drug_patents()
Drug Patents parser A property right issued by the United States Patent and Trademark Office (USPTO) to an inventor for a limited time, in exchange for public disclosure of the invention when the patent is granted. Drugs may be issued multiple patents.
drug_pdb_entries()
Drug pdb-entries parser
drug_pharmacology()
Drug Pharmacology parser
drug_prices()
Drug Prices Parsers
drug_products()
Drug Products parser
drug_reactions()
Drug Reactions Parsers
drug_reactions_enzymes()
Drug Reactions Enzymes Parsers
drug_salts()
Drug Salts parser
drug_sequences()
Drug Sequences parser
drug_snp_adverse_reactions()
Drug SNP Adverse Drug Reactions parser
drug_snp_effects()
Drug SNP Effects parser
drug_syn()
Drug Synonyms parser

Pathway Parsers

Pathway related parser

drug_pathway()
Drug Pathway parser
drug_pathway_drugs()
Drug Pathway Drugs parser
drug_pathway_enzyme()
Drug Pathway Enzymes parser

References Parsers

Books, Links, Articles and Attachments parsres

drugs_articles() carriers_articles() enzymes_articles() targets_articles() transporters_articles()
Drugs/ Carriers/ Enzymes/ Targets/ Transporters articles element parser
drugs_attachments() carriers_attachments() enzymes_attachments() targets_attachments() transporters_attachments()
Drugs/ Carriers/ Enzymes/ Targets/ Transporters attachments element parser
drugs_textbooks() carriers_textbooks() enzymes_textbooks() targets_textbooks() transporters_textbooks()
Drugs/ Carriers/ Enzymes/ Targets/ Transporters books element parser
drugs_links() carriers_links() enzymes_links() targets_links() transporters_links()
Drugs/ Carriers/ Enzymes/ Targets/ Transporters links element parser
references()
Drugs/ Carriers/ Enzymes/ Targets/ Transporters references element parser