Package index • dbparser

Drugs Databases Parser

Parse public drug databases and converted them into dvobject

cett_nodes_options(): returns carriers, enzymes,targets and transporters node valid options.
drug_node_options(): returns drug node valid options.
parseDrugBank(): parseDrugBank
parseOnSIDES(): Parse the OnSIDES Core Relational Database
parseTWOSIDES(): Parse the TWOSIDES Drug-Drug Interaction Database
references_node_options(): returns references node valid options.

Utility functions

Different functions to handle dvobject

add_database_info(): add_database_info Assign passed databases db metadata to passed dvobject
show_dvobject_metadata(): Display dvobject Metadata
subset_drugbank_dvobject(): Subset a DrugBank dvobject by a vector of DrugBank IDs
subset_onsides_dvobject(): Subset an OnSIDES dvobject by a vector of RxNorm Ingredient IDs (Schema-Aware)

Merge functions

Different functions to merge different types of dvobjects

merge_drugbank_onsides(): Merge DrugBank and OnSIDES Database Objects
merge_drugbank_twosides(): Merge a DrugBank dvobject with a TWOSIDES dvobject