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Get Gene Search

Source: R/get_gene_search.R
get_gene_search.Rd

Find genes that are partial or complete match of a gene_id

  • gene_id could be a gene symbol, a gencode ID, or an Ensemble ID

  • Gencode Version and Genome Build must be specified

GTEx Portal API documentation

Usage

get_gene_search(
  geneId,
  gencodeVersion = "v26",
  genomeBuild = "GRCh38/hg38",
  page = 0,
  itemsPerPage = 250
)

Arguments

geneId

String. A gene symbol, a gencode ID, or an Ensemble ID.

gencodeVersion

String (default = "v26"). GENCODE annotation release. Either "v26" or "v19".

genomeBuild

String. Options: "GRCh38/hg38", "GRCh37/hg19". Default = "GRCh38/hg38".

page

Integer (default = 0).

itemsPerPage

Integer (default = 250).

Value

A tibble.

See also

Other Reference Genome Endpoints: get_exons(), get_genes(), get_genomic_features(), get_gwas_catalog_by_location(), get_neighbor_gene(), get_transcripts()

Examples

if (FALSE) { # \dontrun{
get_gene_search("CRP")
} # }