Uses seed sequence BLAST results and IDs to join clusters identified as sisters into single clusters. Resulting object is of joined clusters, merging is required to reformat the clusters for subsequent analysis.
See also
Other run-private:
batcher(),
blast_clstr(),
blast_filter(),
blast_setup(),
blast_sqs(),
blastcache_load(),
blastcache_save(),
blastdb_gen(),
blastn_run(),
cache_rm(),
cache_setup(),
clade_select(),
clstr2_calc(),
clstr_all(),
clstr_direct(),
clstr_sqs(),
clstr_subtree(),
clstrarc_gen(),
clstrarc_join(),
clstrrec_gen(),
clstrs_calc(),
clstrs_merge(),
clstrs_renumber(),
clstrs_save(),
cmdln(),
descendants_get(),
download_obj_check(),
error(),
gb_extract(),
hierarchic_download(),
info(),
ncbicache_load(),
ncbicache_save(),
obj_check(),
obj_load(),
obj_save(),
outfmt_get(),
parameters_load(),
parameters_setup(),
parent_get(),
progress_init(),
progress_read(),
progress_reset(),
progress_save(),
rank_get(),
rawseqrec_breakdown(),
safely_connect(),
search_and_cache(),
searchterm_gen(),
seeds_blast(),
seq_download(),
seqarc_gen(),
seqrec_augment(),
seqrec_convert(),
seqrec_gen(),
seqrec_get(),
sids_check(),
sids_get(),
sids_load(),
sids_save(),
sqs_count(),
sqs_save(),
stage_args_check(),
stages_run(),
tax_download(),
taxdict_gen(),
taxtree_gen(),
txids_get(),
txnds_count(),
warn()