Skip to contents

Return node ids for connecting from to to.

Usage

getPath(tree, from, to)

Arguments

tree

TreeMan object

from

starting node id

to

ending node id

Details

Returns a vector, first id is from to to.

Examples


data(mammals)
# what's the phylogenetic distance from humans to gorillas?
ape_id <- getPrnt(mammals, ids = c("Homo_sapiens", "Hylobates_concolor"))
pth <- getPath(mammals, from = "Homo_sapiens", to = "Gorilla_gorilla")
sum(getNdsSlt(mammals, ids = pth, slt_nm = "spn"))
#> [1] 32.4