
Get all openSNP phenotypes, their variations, and how many users have data available for a given phenotype.
Source:R/allphenotypes.R
allphenotypes.RdEither return data.frame with all results, or output a list, then call the characteristic by id (parameter = "id") or name (parameter = "characteristic").
Arguments
- df
Return a data.frame of all data. The column known_variations can take multiple values, so the other columns id, characteristic, and number_of_users are replicated in the data.frame. Default:
FALSE- ...
Curl options passed on to crul::HttpClient
See also
Other opensnp-fxns:
allgensnp(),
annotations(),
download_users(),
fetch_genotypes(),
genotypes(),
phenotypes_byid(),
phenotypes(),
users()
Examples
if (FALSE) { # \dontrun{
# Get all data
allphenotypes(df = TRUE)
# Output a list, then call the characterisitc of interest by 'id' or
# 'characteristic'
datalist <- allphenotypes()
names(datalist) # get list of all characteristics you can call
datalist[["ADHD"]] # get data.frame for 'ADHD'
datalist[c("mouth size", "SAT Writing")] # get data.frame for 'ADHD'
} # }