Function reference • rsnps

All functions

allgensnp(): Get openSNP genotype data for all users at a particular snp.

allphenotypes(): Get all openSNP phenotypes, their variations, and how many users have data available for a given phenotype.

annotations(): Get all openSNP phenotypes, their variations, and how many users have data available for a given phenotype.

download_users(): Download openSNP user files.

fetch_genotypes(): Download openSNP genotype data for a user

genotypes(): Get openSNP genotype data for one or multiple users.

get_frequency(): Internal function to get the frequency of the variants from different studies.

get_gene_names(): Internal function to get gene names.

get_placements(): Internal function to get the position, alleles, assembly, hgvs notation

ncbi_snp_query(): Query NCBI's refSNP for information on a set of SNPs via the API

phenotypes(): Get openSNP phenotype data for one or multiple users.

phenotypes_byid(): Get all openSNP known variations and all users sharing that phenotype for one phenotype(-ID).

read_users(): Read in openSNP user files from local storage.

release_bullets(): For use with usethis::use_release_issue()

rsnps-defunct: Defunct functions in rsnps

rsnps-package rsnps: Get SNP (Single-Nucleotide Polymorphism) Data on the Web

users(): Get openSNP users.