This calculates the DVR using the non-invasive reference Logan method for all TACs in a supplied tac file. It uses DVR_ref_Logan.
Arguments
- tac_data
The time-activity curve data from tac_roi()
- ref
Required – The reference region, e.g. "cerebellum"
- k2prime
Required – A fixed value for k2' must be specified (e.g. 0.2)
- t_star
Required – If 0, t* will be calculated using find_t_star()
- error
For find_t_star()
- method
Method of integration, "trapz" or "integrate"
- ...
When called from tm_batch, unused parameters may be supplied
References
Logan, J., Fowler, J. S., Volkow, N. D., Wang, G.-J., Ding, Y.-S., & Alexoff, D. L. (1996). Distribution Volume Ratios without Blood Sampling from Graphical Analysis of PET Data. Journal of Cerebral Blood Flow & Metabolism, 16(5), 834-840. https://doi.org/10.1097/00004647-199609000-00008
See also
Other Logan plot functions: DVR_ref_Logan,
dvr, plot.ref_Logan
Examples
f <- system.file("extdata", "AD06.tac", package="tacmagic")
fv <- system.file("extdata", "AD06_TAC.voistat", package="tacmagic")
AD06_tac <- load_tac(f, format="PMOD")
AD06_volume <- load_vol(fv, format="voistat")
AD06 <- tac_roi(tac=AD06_tac, volumes=AD06_volume, ROI_def=roi_ham_pib(),
merge=FALSE, PVC=FALSE)
AD06_DVR <- DVR_all_ref_Logan(AD06, ref="cerebellum", k2prime=0.2, t_star=23)
#> Trying leftfrontal
#> Trying rightfrontal
#> Trying lefttemporal
#> Trying righttemporal
#> Trying leftparietal
#> Trying rightparietal
#> Trying leftoccipital
#> Trying rightoccipital
#> Trying leftcingulate
#> Trying rightcingulate
#> Trying frontal
#> Trying temporal
#> Trying parietal
#> Trying occipital
#> Trying cingulate
#> Trying cerebellum
#> Trying totalcortical
#> Trying leftdeep
#> Trying rightdeep
#> Trying deep
#> Trying ventricles
#> Trying whitematter
#> Trying amyloidcomp