‘treeio’ is an R package to make it easier to import and store phylogenetic tree with associated data; and to link external data from different sources to phylogeny. It also supports exporting phylogenetic tree with heterogeneous associated data to a single tree file and can be served as a platform for merging tree with associated data and converting file formats.
Visit https://yulab-smu.top/treedata-book/ for details.
Get the released version from Bioconductor:
## try http:// if https:// URLs are not supported if (!requireNamespace("BiocManager", quietly=TRUE)) install.packages("BiocManager") ## BiocManager::install("BiocUpgrade") ## you may need this BiocManager::install("treeio")
Or the development version from github:
## install.packages("devtools") devtools::install_github("GuangchuangYu/treeio")
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