Class "jplace" This class stores phylogenetic placements — jplace-class • treeio

Class "jplace" This class stores phylogenetic placements

Slots

phylo: phylo object for tree structure
treetext: newick tree string
data: associated data
extraInfo: extra information, reserve for merge_tree
file: tree file
placements: reserve for jplace file to store placement information
info: extra information, e.g. metadata, software version etc.

Author

Guangchuang Yu https://guangchuangyu.github.io