read.nhx

read nhx tree file

read.nhx(file)

Arguments

file	nhx file

Value

nhx object

Author

Guangchuang Yu https://guangchuangyu.github.io

Examples

nhxfile <- system.file("extdata/NHX", "ADH.nhx", package="treeio")
read.nhx(nhxfile)
#> 'treedata' S4 object that stored information of
#> 	'/cache/treeio/extdata/NHX/ADH.nhx'.
#> 
#> [email protected] phylo: 
#> Phylogenetic tree with 8 tips and 4 internal nodes.
#> 
#> Tip labels:
#>   ADH2, ADH1, ADHY, ADHX, ADH4, ADH3, ...
#> 
#> Rooted; includes branch lengths.
#> 
#> with the following features available:
#> 	'S',	'D',	'B'.