Get cohorts of XenaHub object
Arguments
- x
a XenaHub object
Examples
xe = XenaGenerate(subset = XenaHostNames == "tcgaHub"); cohorts(xe)
#> [1] "TCGA Ovarian Cancer (OV)"
#> [2] "TCGA Kidney Clear Cell Carcinoma (KIRC)"
#> [3] "TCGA Lower Grade Glioma (LGG)"
#> [4] "TCGA Kidney Papillary Cell Carcinoma (KIRP)"
#> [5] "TCGA Pan-Cancer (PANCAN)"
#> [6] "TCGA Bile Duct Cancer (CHOL)"
#> [7] "TCGA Colon and Rectal Cancer (COADREAD)"
#> [8] "TCGA Adrenocortical Cancer (ACC)"
#> [9] "TCGA Cervical Cancer (CESC)"
#> [10] "TCGA Rectal Cancer (READ)"
#> [11] "TCGA Sarcoma (SARC)"
#> [12] "TCGA Large B-cell Lymphoma (DLBC)"
#> [13] "TCGA Prostate Cancer (PRAD)"
#> [14] "TCGA Lung Cancer (LUNG)"
#> [15] "TCGA Liver Cancer (LIHC)"
#> [16] "TCGA Kidney Chromophobe (KICH)"
#> [17] "TCGA Head and Neck Cancer (HNSC)"
#> [18] "TCGA Pheochromocytoma & Paraganglioma (PCPG)"
#> [19] "TCGA Esophageal Cancer (ESCA)"
#> [20] "TCGA Thyroid Cancer (THCA)"
#> [21] "TCGA Lung Adenocarcinoma (LUAD)"
#> [22] "TCGA Acute Myeloid Leukemia (LAML)"
#> [23] "TCGA Bladder Cancer (BLCA)"
#> [24] "TCGA Melanoma (SKCM)"
#> [25] "TCGA Lung Squamous Cell Carcinoma (LUSC)"
#> [26] "TCGA Testicular Cancer (TGCT)"
#> [27] "TCGA Pancreatic Cancer (PAAD)"
#> [28] "TCGA Glioblastoma (GBM)"
#> [29] "TCGA Stomach Cancer (STAD)"
#> [30] "TCGA Mesothelioma (MESO)"
#> [31] "TCGA Ocular melanomas (UVM)"
#> [32] "TCGA lower grade glioma and glioblastoma (GBMLGG)"
#> [33] "TCGA Thymoma (THYM)"
#> [34] "TCGA Endometrioid Cancer (UCEC)"
#> [35] "TCGA Breast Cancer (BRCA)"
#> [36] "TCGA Uterine Carcinosarcoma (UCS)"
#> [37] "TCGA Colon Cancer (COAD)"
#> [38] "TCGA Formalin Fixed Paraffin-Embedded Pilot Phase II (FPPP)"