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stantargets-package

targets: Targets Archetypes for Stan

Examples

tar_stan_example_data()

Simulate example data for tar_stan_example_file().

tar_stan_example_file()

Write an example Stan model file.

MCMC

tar_stan_mcmc()

One MCMC per model with multiple outputs

tar_stan_mcmc_rep_diagnostics()

Multiple MCMCs per model with sampler diagnostics

tar_stan_mcmc_rep_draws()

Multiple MCMC runs per model with draws

tar_stan_mcmc_rep_summary()

Multiple MCMCs per model with summaries

Generated quantities

tar_stan_gq()

Generated quantities on an existing CmdStanFit object

tar_stan_gq_rep_draws()

Multiple runs of generated quantities per model with draws

tar_stan_gq_rep_summary()

Multiple runs of generated quantities per model with summaries

Variational Bayes

tar_stan_vb()

One variational Bayes run per model with multiple outputs

tar_stan_vb_rep_draws()

Multiple variational Bayes runs per model with draws

tar_stan_vb_rep_summary()

Multiple iterations per model of variational Bayes with summaries

Optimization

tar_stan_mle()

One optimization run per model with multiple outputs

tar_stan_mle_rep_draws()

Multiple optimization runs per model with draws

tar_stan_mle_rep_summary()

Multiple optimization runs per model with summaries

Other targets

tar_stan_compile()

Stan model compilation

tar_stan_summary()

One summary of a CmdStanFit object