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Harmonize outputs of get_site_speciesOccurrence and map them into eLTER reporting format

Source: R/eLTER_reporting_occ.R
map_occ_obis2elter.Rd

[Experimental]

Usage

map_occ_obis2elter(x, deimsid, version = "1.3")

Arguments

x

A tibble like one that can be obtained by as_tibble(get_site_speciesOccurrences(deimsid, "gbif")$gbif)

deimsid

A character. The DEIMS.iD of the site from DEIMS-SDR website. DEIMS ID information

version

A character for select the version of eLTER Data Reporting Format. Default 1.3

Value

list with the following named elements:

  • deimsid: the same deimsid passed in input

  • source: one of "gbif", "inat", "obis"

  • data_mapping: tibble structured according to data_mapping of eLTER reporting format

  • reference_TAXA: tibble structured according to reference_TAXA of eLTER reporting format

  • reference_VARIABLES: tibble structured according to reference_VARIABLES of eLTER reporting format

Author

Paolo Tagliolato, phD tagliolato.p@irea.cnr.it

Martina Zilioli zilioli.m@irea.cnr.it

Alessandro Oggioni, phD oggioni.a@irea.cnr.it