Parses the core relational tables from the OnSIDES database.
Usage
parseOnSIDES(
dataDir,
include_high_confidence = TRUE,
db_version = NULL,
db_exported_date = NULL
)Arguments
- dataDir
A string specifying the path to the directory containing the OnSIDES CSV files.
- include_high_confidence
Logical. If TRUE (the default), the function will also parse the `high_confidence.csv` file, which is a pre-aggregated summary of ingredient-to-effect relationships. If the file is not found, a warning is issued.
- db_version
used onside version (default = NULL)
- db_exported_date
used onside release date (default = NULL)
See also
Other parsers:
cett_nodes_options(),
drug_node_options(),
parseDrugBank(),
parseTWOSIDES(),
references_node_options()
Other parsers:
cett_nodes_options(),
drug_node_options(),
parseDrugBank(),
parseTWOSIDES(),
references_node_options()