Returns data frame with supported interaction types
Usage
get_interaction_types(opts = list(), read_csv = read_csv_online)
See also
Other interactions:
get_interaction_matrix()
,
get_interactions_by_taxa()
,
get_interactions_by_type()
,
get_interactions()
,
get_predators_of()
,
get_prey_of()
Examples
# \donttest{
get_interaction_types()
#> interaction source target
#> 1 eats consumer food
#> 2 eatenBy food consumer
#> 3 preysOn predator prey
#> 4 preyedUponBy prey predator
#> 5 kills killer victim
#> 6 killedBy victim killer
#> 7 parasiteOf parasite host
#> 8 hasParasite host parasite
#> 9 endoparasiteOf endoparasite host
#> 10 hasEndoparasite host endoparasite
#> 11 ectoparasiteOf ectoparasite host
#> 12 hasEctoparasite host ectoparasite
#> 13 parasitoidOf parasitoid host
#> 14 hasParasitoid host parasitoid
#> 15 hostOf host symbiont
#> 16 hasHost symbiont host
#> 17 pollinates pollinator plant
#> 18 pollinatedBy plant pollinator
#> 19 pathogenOf pathogen host
#> 20 hasPathogen host pathogen
#> 21 vectorOf vector pathogen
#> 22 hasVector pathogen vector
#> 23 dispersalVectorOf vector seed
#> 24 hasDispersalVector seed vector
#> 25 hasHabitat inhabitant habitat
#> 26 createsHabitatFor habitat inhabitant
#> 27 epiphyteOf plant/algae host plant
#> 28 hasEpiphyte plant plant/algae
#> 29 providesNutrientsFor host consumer
#> 30 acquiresNutrientsFrom consumer host
#> 31 symbiontOf symbiont symbiont
#> 32 mutualistOf mutualist mutualist
#> 33 commensalistOf commensalist commensalist
#> 34 flowersVisitedBy plant visitor
#> 35 visitsFlowersOf visitor plant
#> 36 ecologicallyRelatedTo source target
#> 37 coOccursWith source target
#> 38 coRoostsWith source target
#> 39 interactsWith source target
#> 40 adjacentTo source target
#> termIRI
#> 1 http://purl.obolibrary.org/obo/RO_0002470
#> 2 http://purl.obolibrary.org/obo/RO_0002471
#> 3 http://purl.obolibrary.org/obo/RO_0002439
#> 4 http://purl.obolibrary.org/obo/RO_0002458
#> 5 http://purl.obolibrary.org/obo/RO_0002626
#> 6 http://purl.obolibrary.org/obo/RO_0002627
#> 7 http://purl.obolibrary.org/obo/RO_0002444
#> 8 http://purl.obolibrary.org/obo/RO_0002445
#> 9 http://purl.obolibrary.org/obo/RO_0002634
#> 10 http://purl.obolibrary.org/obo/RO_0002635
#> 11 http://purl.obolibrary.org/obo/RO_0002632
#> 12 http://purl.obolibrary.org/obo/RO_0002633
#> 13 http://purl.obolibrary.org/obo/RO_0002208
#> 14 http://purl.obolibrary.org/obo/RO_0002209
#> 15 http://purl.obolibrary.org/obo/RO_0002453
#> 16 http://purl.obolibrary.org/obo/RO_0002454
#> 17 http://purl.obolibrary.org/obo/RO_0002455
#> 18 http://purl.obolibrary.org/obo/RO_0002456
#> 19 http://purl.obolibrary.org/obo/RO_0002556
#> 20 http://purl.obolibrary.org/obo/RO_0002557
#> 21 http://purl.obolibrary.org/obo/RO_0002459
#> 22 http://purl.obolibrary.org/obo/RO_0002460
#> 23 no:match
#> 24 no:match
#> 25 http://purl.obolibrary.org/obo/RO_0002303
#> 26 http://purl.obolibrary.org/obo/RO_0008505
#> 27 http://purl.obolibrary.org/obo/RO_0008501
#> 28 http://purl.obolibrary.org/obo/RO_0008502
#> 29 http://purl.obolibrary.org/obo/RO_0002469
#> 30 http://purl.obolibrary.org/obo/RO_0002457
#> 31 http://purl.obolibrary.org/obo/RO_0002440
#> 32 http://purl.obolibrary.org/obo/RO_0002442
#> 33 http://purl.obolibrary.org/obo/RO_0002441
#> 34 http://purl.obolibrary.org/obo/RO_0002623
#> 35 http://purl.obolibrary.org/obo/RO_0002622
#> 36 http://purl.obolibrary.org/obo/RO_0002321
#> 37 http://purl.obolibrary.org/obo/RO_0008506
#> 38 http://purl.obolibrary.org/obo/RO_0002801
#> 39 http://purl.obolibrary.org/obo/RO_0002437
#> 40 http://purl.obolibrary.org/obo/RO_0002220
# }