Function reference • spiro

General data import and processing

spiro(): Import and process raw data from metabolic carts/spiroergometric measures

add_bodymass(): Calculate additional variables related to body mass for cardiopulmonary exercise testing data

spiro_raw(): Get raw data from a metabolic cart file or an imported spiro object

spiro_import(): Import raw data from spiroergometric devices (deprecated)

get_anonid(): Get the anonymization id from personal data

Working with additional heart rate data

add_hr(): Import and add heart rate data to cardiopulmonary exercise testing data

Data filtering

spiro_smooth(): Apply a smoothing filter to data from cardiopulmonary exercise testing.

bw_filter(): Smooth data with a (zero-phase) Butterworth filter

Working with protocols

add_protocol(): Add a test protocol to an exercise testing data set

get_protocol(): Guess a test protocol from a corresponding exercise testing data set

set_protocol_manual(): Manually setting a testing profile

set_protocol() pt_pre() pt_wu() pt_steps() pt_const(): Setting an exercise testing profile

Summarizing

spiro_summary(): Summarize data from cardiopulmonary exercise testing for each load step

spiro_max(): Return maximum values from cardiopulmonary exercise tests

Plotting

spiro_plot(): Plot data from cardiopulmonary exercise data files

General package functions

spiro-package: spiro: Manage Data from Cardiopulmonary Exercise Testing

spiro_example(): Get path to spiro example

knit_print(<spiro>): Printing spiro data frames in a knitr context

print(<spiro>): Printing spiro data frames