General information

spocc-package

Interface to many species occurrence data sources

Queries

occ()

Search for species occurrence data across many data sources.

occ_names()

Search for species names across many data sources.

occ_names_options()

Look up options for parameters passed to each source for occ_names function

occ_options()

Look up options for parameters passed to each source

print(<occdat>) print(<occdatind>) summary(<occdat>) summary(<occdatind>) print(<occnames>)

spocc objects and their print, plot, and summary methods

Query helpers - Bounding boxes

bbox2wkt() wkt2bbox()

Convert a bounding box to a Well Known Text polygon, and a WKT to a bounding box

wkt_vis()

Visualize well-known text area's on a map.

Output enrichment and cleaning

inspect()

Get more data on individual occurrences

fixnames()

Change names to be the same for each taxon.

spocc_duplicates

A note about duplicate occurrence records

Output conversion

occ2df()

Combine results from occ calls to a single data.frame

as.ala()

Coerce occurrence keys to ALA id objects

as.bison()

Coerce occurrence keys to bisonkey/occkey objects

as.ecoengine()

Coerce occurrence keys to ecoenginekey/occkey objects

as.gbif()

Coerce occurrence keys to gbifkey/occkey objects

as.idigbio()

Coerce occurrence keys to idigbio objects

as.inat()

Coerce occurrence keys to iNaturalist id objects

as.obis()

Coerce occurrence keys to obis id objects

as.vertnet()

Coerce occurrence keys to vertnetkey/occkey objects