Package index • spocc

General information

spocc-package: Interface to many species occurrence data sources

Queries

occ(): Search for species occurrence data across many data sources.

occ_names(): Search for species names across many data sources.

occ_names_options(): Look up options for parameters passed to each source for occ_names function

occ_options(): Look up options for parameters passed to each source

print(<occdat>) print(<occdatind>) summary(<occdat>) summary(<occdatind>) print(<occnames>): spocc objects and their print, plot, and summary methods

Query helpers - Bounding boxes

bbox2wkt() wkt2bbox(): Convert a bounding box to a Well Known Text polygon, and a WKT to a bounding box

wkt_vis(): Visualize well-known text area's on a map.

Output enrichment and cleaning

inspect(): Get more data on individual occurrences

fixnames(): Change names to be the same for each taxon.

spocc_duplicates: A note about duplicate occurrence records

Output conversion

occ2df(): Combine results from occ calls to a single data.frame

as.ala(): Coerce occurrence keys to ALA id objects

as.gbif(): Coerce occurrence keys to gbifkey/occkey objects

as.idigbio(): Coerce occurrence keys to idigbio objects

as.inat(): Coerce occurrence keys to iNaturalist id objects

as.obis(): Coerce occurrence keys to obis id objects

as.vertnet(): Coerce occurrence keys to vertnetkey/occkey objects