Package index • taxa

All functions

as_data_frame(): Convert a taxa object to a data.frame
as_taxon(): Convert to a taxon vector
classification(): Taxon class
db_ref: Valid taxonomy databases
`%in%`: Value matching for taxa package
internodes(): Get internodes
is_classification(): Check if is a classification
is_internode(): Check if taxa are internodes
is_leaf(): Check if taxa are leaves
is_root(): Test if taxa are roots
is_stem(): Check if taxa are stems
is_taxon(): Check if something is a taxon object
is_taxon_authority(): Check if is a taxon_authority
is_taxon_db(): Check if something is a taxon_db
is_taxon_id(): Check if something is a taxon_id object
is_taxon_rank(): Check if something is a taxon_rank
is_taxonomy(): Check if something is a taxonomy
leaves(): Get leaves
n_leaves(): Number of leaves per taxon
n_subtaxa(): Number of subtaxa per taxon
n_supertaxa(): Number of supertaxa per taxon
roots(): Get root taxa
stems(): Get stems
subtaxa(): Get subtaxa
supertaxa(): Get supertaxa
tax_auth() `tax_auth<-`(): Set and get taxon authorities
tax_author() `tax_author<-`(): Set and get taxon authors
tax_cite() `tax_cite<-`(): Set and get taxon authority citations
tax_date() `tax_date<-`(): Set and get taxon authority dates
tax_db() `tax_db<-`(): Set and get taxon ID databases
tax_id() `tax_id<-`(): Set and get taxon IDs
tax_name() `tax_name<-`(): Set and get taxon names
tax_rank() `tax_rank<-`(): Set and get taxon ranks
taxa_taxon-class taxa_taxon: Taxon class
taxa_taxon_authority-class taxa_taxon_authority: Taxon authority class
taxa_taxon_db-class taxa_taxon_db: Taxon database class
taxa_taxon_id-class taxa_taxon_id: Taxon ID class
taxa_taxon_rank-class taxa_taxon_rank: Taxon rank class
taxa_taxonomy-class taxa_taxonomy: Taxonomy class
taxon(): Taxon class
taxon_authority(): Taxon authority class
taxon_db(): Taxon database class
taxon_id(): Taxon ID class
taxon_rank(): Taxon rank class