Function reference • taxa

All functions

as_data_frame(): Convert a taxa object to a data.frame

as_taxon(): Convert to a taxon vector

classification(): Taxon class

db_ref: Valid taxonomy databases

`%in%`: Value matching for taxa package

internodes(): Get internodes

is_classification(): Check if is a classification

is_internode(): Check if taxa are internodes

is_leaf(): Check if taxa are leaves

is_root(): Test if taxa are roots

is_stem(): Check if taxa are stems

is_taxon(): Check if something is a taxon object

is_taxon_authority(): Check if is a taxon_authority

is_taxon_db(): Check if something is a taxon_db

is_taxon_id(): Check if something is a taxon_id object

is_taxon_rank(): Check if something is a taxon_rank

is_taxonomy(): Check if something is a taxonomy

leaves(): Get leaves

n_leaves(): Number of leaves per taxon

n_subtaxa(): Number of subtaxa per taxon

n_supertaxa(): Number of supertaxa per taxon

roots(): Get root taxa

stems(): Get stems

subtaxa(): Get subtaxa

supertaxa(): Get supertaxa

tax_auth() `tax_auth<-`(): Set and get taxon authorities

tax_author() `tax_author<-`(): Set and get taxon authors

tax_cite() `tax_cite<-`(): Set and get taxon authority citations

tax_date() `tax_date<-`(): Set and get taxon authority dates

tax_db() `tax_db<-`(): Set and get taxon ID databases

tax_id() `tax_id<-`(): Set and get taxon IDs

tax_name() `tax_name<-`(): Set and get taxon names

tax_rank() `tax_rank<-`(): Set and get taxon ranks

taxa_taxon-class taxa_taxon: Taxon class

taxa_taxon_authority-class taxa_taxon_authority: Taxon authority class

taxa_taxon_db-class taxa_taxon_db: Taxon database class

taxa_taxon_id-class taxa_taxon_id: Taxon ID class

taxa_taxon_rank-class taxa_taxon_rank: Taxon rank class

taxa_taxonomy-class taxa_taxonomy: Taxonomy class

taxon(): Taxon class

taxon_authority(): Taxon authority class

taxon_db(): Taxon database class

taxon_id(): Taxon ID class

taxon_rank(): Taxon rank class