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Changelog

Source: NEWS.md

nlrx 0.4.5

CRAN release: 2024-01-29

Functionality

  • No functionality updates

Bugfixes

  • documentation update to fix CRAN check notes

nlrx 0.4.4

CRAN release: 2023-05-16

Functionality

  • added support to download_netLogo() for up to NetLogo version 6.3.0
  • adjusted test_nlrx() to work with new NetLogo directory structure (6.3.0)
  • added writeRDS parameter to run_nl_all() for storing intermediate results

Bugfixes

  • updating Java Version Requirement in DESCRIPTION
  • refactoring download_netlogo function
  • Fix readr problems with util_runnl() (deprecated in path argument in write_lines)
  • Fix path problems
  • Fix to allow for list output in agent variables (metrics.turtles, metrics.patches, metrics.links)

nlrx 0.4.3

CRAN release: 2021-09-20

Functionality

  • added test_nlrx() function to check functionality of the package
  • added support to download_netLogo() for NetLogo version 6.2.0

Bugfixes

  • changed timestamp for nldoc function from lubridate to base date
  • fixed an error in the function parser of the nldoc procedure
  • fixed bug in calculation of number of computed runs in print_nl()

nlrx 0.4.2

CRAN release: 2020-11-13

Functionality

  • added option to run_nl_one that allows to store results as rds files
  • added eval_simoutput option to check for missing combinations of siminputrow and random-seeds
  • added support for progressr progress bars for run_nl_all function (details see further notes vignette) and removed the silent parameter of the run_nl_all function

Bugfixes

  • hotfix for another dependency on external files in nldoc roxygen examples
  • small bugfix in analyze_morris: A warning is now thrown if NA are present in the simulation data
  • bugfix in random seed generator
  • bugfix for sobol simulation design when sobolorder is higher than the available number of variables
  • analyze_nl now prints a warning if missing combinations were detected in the simulation output
  • updated testdata
  • user rights for temporary sh scripts are now set correctly

nlrx 0.4.1

CRAN release: 2020-02-07

  • fixed dependency on external file source in nldoc automated tests
  • these files are now included in the package
  • added link to documentation website in description

nlrx 0.4.0

CRAN release: 2019-12-03

  • Added new simdesigns simdesign_ABCmcmc_Marjoram, simdesign_ABCmcmc_Marjoram_original and simdesign_ABCmcmc_Wegmann to perform approximate bayesian computation
  • Added print function for nl objects
  • Added dependencies: crayon, EasyABC
  • Added pandoc to system requirements
  • Added additional pandoc_available() check for nldoc function
  • Added support to download_netLogo() for NetLogo version 6.1.1
  • Added new vignette showing an example for approximate bayesian computation with nlrx
  • Updated “Sensitivity Analyses with nlrx”” vignette
  • Updated “Advanced Configuration” vignette
  • Updated package tests

nlrx 0.3.0

CRAN release: 2019-09-26

  • Added support for self-defined evaluation functions to optimization functions simdesign_GenAlg and simdesign_GenSA.
  • Added support to simdesign_simple() for models without any GUI parameters
  • Added support to download_netLogo() for NetLogo version 6.1.0
  • Added new vignette showing an example for Sensitivity Analysis with nlrx.
  • Added new vignette showing an example for Optimization with nlrx.
  • Updated “Advanced Configuration” vignette.
  • Updated citation information of the package.
  • Hotfix for unnest_simoutput(). In the previous package version, under some circumstances an error occured due to NA data.
  • Corrected spelling errors in some vignettes and documentation files.

nlrx 0.2.0

CRAN release: 2019-03-28

  • nl_to_raster() hotfix

nlrx 0.1.0

CRAN release: 2019-03-18

  • First release to CRAN.