rgbifHigh level overview of package |
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Interface to the Global Biodiversity Information Facility API. |
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Defunct functions in rgbif |
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Many value inputs to some parameters |
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datasetsrgbif datasets |
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Table of country two character ISO codes, and GBIF names |
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Vector of fields in the output for the function |
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Type status options for GBIF searching |
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Geometry |
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Check input WKT |
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Convert a bounding box to a Well Known Text polygon, and a WKT to a bounding box |
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OAI |
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GBIF registry data via OAI-PMH |
RegistryGBIF registry functions https://www.gbif.org/developer/registry |
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Get details on a GBIF dataset. |
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Search datasets in GBIF. |
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Suggest datasets in GBIF. |
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Search for datasets and dataset metadata. |
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Organizations metadata. |
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Networks metadata. |
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Nodes metadata. |
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Installations metadata. |
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MapsWork with the GBIF Maps API https://www.gbif.org/developer/maps |
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Fetch aggregated density maps of GBIF occurrences |
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Fetch Map Vector Tiles (MVT) |
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NamesWork with the GBIF taxonomic names API https://www.gbif.org/developer/species |
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Lookup names in the GBIF backbone taxonomy. |
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Parse and examine further GBIF name issues on a dataset. |
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Lookup names in all taxonomies in GBIF. |
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Suggest up to 20 name usages. |
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Lookup details for specific names in all taxonomies in GBIF. |
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Occurrence DownloadsWork with the GBIF occurrence downloads APIs https://www.gbif.org/developer/occurrence#download |
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Spin up a download request for GBIF occurrence data. |
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Check for downloads already in your GBIF account |
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Cancel a download creation process. |
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Lists the downloads activity of a dataset |
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List datasets for a download |
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Get a download from GBIF. |
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Import a downloaded file from GBIF. |
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Lists the downloads created by a user. |
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Retrieves the occurrence download metadata by its unique key. |
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Download requests in a queue |
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Wait for an occurrence download to be done |
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Downloads interface |
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Download predicate DSL (domain specific language) |
Occurrence SearchWork with the GBIF occurrence search APIs https://www.gbif.org/developer/occurrence |
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Facet GBIF occurrences |
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Get data for GBIF occurrences by occurrence key |
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Search for GBIF occurrences - simplified for speed |
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Search for catalog numbers, collection codes, collector names, and institution codes. |
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Search for GBIF occurrences |
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Get number of occurrence records. |
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Facetted count occurrence search. |
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Occurrence data cleaningFunctions for cleaning occurrence data |
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List all GBIF issues and their codes. |
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Parse and examine further GBIF occurrence issues on a dataset. |
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Lookup issue definitions and short codes |
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Miscellaneous |
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Get citation for datasets used |
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Parse taxon names using the GBIF name parser. |
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Look up 2 character ISO country codes |
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Get the possible values to be used for (taxonomic) rank arguments in GBIF API methods. |
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parse wkt into smaller bits |
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Get elevation for lat/long points from a data.frame or list of points. |
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Enumerations. |
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Pretty reports |
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View highlighted terms in name results from GBIF. |
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View photos from GBIF. |